A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

I

IDLE - Static variable in class stimulator.CCDcontrol

IDLE - Static variable in class stimulator.Cycle

IJApplet - Class in <Unnamed>

This is an applet that runs ImageJ.

IJApplet() - Constructor for class IJApplet

Illustrator - Class in stereodisc

Stereo disk photograph analysis.

Illustrator() - Constructor for class stereodisc.Illustrator

ImageBlender_ - Class in <Unnamed>

Computes joint histogram and MI for the same Roi from two images.

ImageBlender_() - Constructor for class ImageBlender_

imageDirectory() - Static method in class stereodisc.Conventions

imageStackFromMatrix(float[][], int) - Static method in class bijnum.BIJutil

Create an ImageJ ImageStack out of a float matrix.

imageStackFromMatrix(short[][], int) - Static method in class bijnum.BIJutil

Create an ImageJ ImageStack out of a float matrix.

IMAQ - Class in va

API for IMAQ interfacing.

IMAQ() - Constructor for class va.IMAQ

IMG_ATTR_ACQ_IN_PROGRESS - Static variable in class va.IMAQ

IMG_ATTR_ACQWINDOW_HEIGHT - Static variable in class va.IMAQ

IMG_ATTR_ACQWINDOW_LEFT - Static variable in class va.IMAQ

IMG_ATTR_ACQWINDOW_TOP - Static variable in class va.IMAQ

IMG_ATTR_ACQWINDOW_WIDTH - Static variable in class va.IMAQ

IMG_ATTR_BITSPERPIXEL - Static variable in class va.IMAQ

IMG_ATTR_BYTESPERPIXEL - Static variable in class va.IMAQ

IMG_ATTR_CALLBACK - Static variable in class va.IMAQ

IMG_ATTR_CURRENT_BUFLIST - Static variable in class va.IMAQ

IMG_ATTR_FRAME_COUNT - Static variable in class va.IMAQ

IMG_ATTR_FRAMEWAIT_MSEC - Static variable in class va.IMAQ

IMG_ATTR_INVERT - Static variable in class va.IMAQ

IMG_ATTR_LAST_VALID_BUFFER - Static variable in class va.IMAQ

IMG_ATTR_LOST_FRAMES - Static variable in class va.IMAQ

IMG_ATTR_NUM_BUFFERS - Static variable in class va.IMAQ

IMG_ATTR_ROI_HEIGHT - Static variable in class va.IMAQ

IMG_ATTR_ROI_LEFT - Static variable in class va.IMAQ

IMG_ATTR_ROI_TOP - Static variable in class va.IMAQ

IMG_ATTR_ROI_WIDTH - Static variable in class va.IMAQ

IMG_ATTR_ROWBYTES - Static variable in class va.IMAQ

IMG_ATTR_START_FIELD - Static variable in class va.IMAQ

IMG_ATTR_TRIGGER_MODE - Static variable in class va.IMAQ

IMG_ATTR_XOFF_BUFFER - Static variable in class va.IMAQ

IMG_ATTR_YOFF_BUFFER - Static variable in class va.IMAQ

in(double, double, double) - Method in class volume.Volume

Check whether x,y,z are within the edges.

index - Variable in class volume.VolumeRGB

The index value for each voxel, if any.

index - Variable in class VolumeJ.VJValue

info - Variable in exception bijnum.SVDCException

info - Variable in exception FlowJ.FlowJException

init() - Method in class IJApplet

Starts ImageJ if it's not already running and displays an image whose name is passed as a parameter.

init() - Method in class Nearest

init(ScriptProcessor) - Method in class retina.OIDAnalyzer

init(ScriptProcessor) - Method in interface retina.OIDBaseAnalyzer

init(ScriptProcessor) - Method in class retina.OIDMapsFitter

init(ScriptProcessor) - Method in class retina.OIDPCAAnalyzer

init(ScriptProcessor) - Method in class retina.OIDroiAnalyzer

init(String) - Method in class retina.OIDroiAnalyzer

init(ScriptProcessor) - Method in class retina.OIDROItimecourseAnalyzer

init(String) - Method in class retina.OIDROItimecourseAnalyzer

Hook for initialization: the first of a sequence that is analyzed.

init(OIDScriptProcessor) - Method in class retina.OIDTimecourseAnalyzer

init() - Method in class stimulator.StimScreen

After initialization this method must be called to start the StimScreen.

initClassifiers() - Static method in class of3d.OF3DClassifiers

initClassifiers() - Static method in class VolumeJ.VJClassifiers

inserts - Static variable in class bijnum.BIJknn

INT - Static variable in class SpeHeader

InterpolateStat(double[][], int, int) - Method in class RuggeriEnhanceUp

intersect(int, int, int) - Method in class VolumeJ.VJCell

intersectRay(float, float) - Method in class VolumeJ.VJPlane

Optimization for finding intersection of this plane with a ray running through x0, y0, 0 with derivative 0,0,1.

intersectTracing(int, int, int) - Method in class VolumeJ.VJCell

intoStack(ImageStack) - Method in class volume.Diffusion3D

intoStack(ImageStack) - Method in class volume.HyperVolume

Transfer hv into stack is.

intoStack(ImageStack) - Method in class volume.VolumeFloat

intToHSB(float[], int) - Static method in class volume.VolumeRGB

Utility routine to convert an ARGB int format to float [] HSB format.

intvalue - Variable in class VolumeJ.VJValue

InvariantGaussianDerivative - Class in features.filterBanks

This class implements a filterbank for invariant Gaussian derivatives relative to the local gradient (gauge coordinates) in oponnency Channel space (dark-bright, red-green and blue-yellow opponency).

InvariantGaussianDerivative(float[], int[]) - Constructor for class features.filterBanks.InvariantGaussianDerivative

invElements(float[]) - Static method in class bijnum.BIJmatrix

Invert the elements of a vector.

inverse(float[][]) - Static method in class bijnum.BIJmatrix

Invert a symmetric matrix m.

inverse() - Method in class VolumeJ.VJMatrix

Invert this matrix.

inversePolar(float[], int, float, Point2D.Float, int, int) - Static method in class stereo.algorithms.Transform

Method to transform an image from polar coordinates back into x,y.

inversePolarSample(Point2D.Float, Point2D.Float, int, int, float) - Static method in class stereo.algorithms.Transform

Transform a single point from polar to x-y coordinates.

invert(float[]) - Static method in class stereo.algorithms.Transform

Invert the values in an image.

isAcquiring() - Method in class stimulator.StimulusJInterface

isamax_j(int, double[], int) - Static method in class bijnum.Blas

This method finds the index of the element of a vector that has the maximum absolute value.

isAudio(Format) - Static method in class usbcam.DeviceInfo

isDemoing() - Method in class stimulator.StimulusJInterface

isEnded() - Method in class stimulator.Cycle

isFullField() - Method in class stimulator.StimulusJInterface

isGrayscale() - Method in class VolumeJ.VJAlphaColor

isGroundTruthBackground(Color) - Static method in class stereodisc.Conventions

isGroundTruthCup(Color) - Static method in class stereodisc.Conventions

Cups are somewhat *&%$&^ yellowish, i.e., G >= 253 and B < = 5.

isGroundTruthDisk(Color) - Static method in class stereodisc.Conventions

Disks are somewhat *&%$&^ red, i.e..

isIdle() - Method in class stimulator.Cycle

isIndexed() - Method in class volume.VolumeRGB

isIterations - Variable in class segmentation.NormalizedOptimalConvexRegion

isNIDEK3DX - Static variable in class stereodisc.SlideCropper

isOD(String) - Static method in class stereodisc.Conventions

isOIDDATFile(String) - Static method in class retina.OIDHeader

Check whether the name can be an OID .dat file, the file with the textual header info.

isOIDFile(String) - Static method in class retina.OIDHeader

Check whether the name can be an OID file.

isOS(String) - Static method in class stereodisc.Conventions

ISOSURFACE - Static variable in class VolumeJ.VJClassifiers

isRestart() - Method in class stimulator.StimulusJInterface

isRightEye() - Method in class retina.OIDHeader

isStatic() - Method in class of3d.OFClassifier

isStatic() - Method in class of3d.OFClassifierScintillans

isValid(VJVoxelLoc, Volume) - Method in class VolumeJ.VJInterpolator

Does vl fall within the bounds of volume for a specific interpolation kernel?

isValid(VJVoxelLoc, Volume) - Method in class VolumeJ.VJNearestNeighbor

Does vl fall within the bounds of volume for a nearest neighbor interpolation?

isValid(VJVoxelLoc, Volume) - Method in class VolumeJ.VJTrilinear

Does vl fall within the bounds of a volume for interpolation?

isValidGradient(VJVoxelLoc, Volume) - Method in class VolumeJ.VJInterpolator

Does vl fall within the bounds of volume for nearest neighbor gradient interpolation?

isValidGradient(VJCell, Volume) - Method in class VolumeJ.VJInterpolator

Does cell c fall within the bounds of a volume for nearest neighbor gradient interpolation?

isValidGradient(VJVoxelLoc, Volume) - Method in class VolumeJ.VJNearestNeighbor

Does vl fall within the bounds of volume for nearest neighbor gradient interpolation?

isValidGradient(VJCell, Volume) - Method in class VolumeJ.VJNearestNeighbor

Does cell c fall within the bounds of a volume for nearest neighbor gradient interpolation?

isValidGradient(VJVoxelLoc, Volume) - Method in class VolumeJ.VJTrilinear

Does vl fall within the bounds of a volume for trilinear gradient interpolation?

isValidGradient(VJCell, Volume) - Method in class VolumeJ.VJTrilinear

Does cell c fall within the bounds of a volume for nearest neighbor gradient interpolation? Bounds are -2...+3 of the cell location (translates to -2...+2 for the voxel location).

isVideo(Format) - Static method in class usbcam.DeviceInfo

itemStateChanged(ItemEvent) - Method in class bd.BDUserInterface

itemStateChanged(ItemEvent) - Method in class stimulator.StimulusJInterface

React to action e.

itemStateChanged(ItemEvent) - Method in class va.PVCAMInterface

React to action e.

itemStateChanged(ItemEvent) - Method in class va.VAInterface

React to action e.

itemStateChanged(ItemEvent) - Method in class VolumeJ.VJUserInterface

React to action e.

ITMAX - Static variable in class bijnum.BIJfit

ITMAX is the maximum allowed number of iterations; CGOLD is the golden ratio; ZEPS is a small number that protects against trying to achieve fractional accuracy for a minimum that happens to be exactly zero.

ix - Variable in class VolumeJ.VJCell

Position of this cell in objectspace coordinates.

ix - Variable in class VolumeJ.VJVoxelLoc

integer floor of voxel location.

IxConverter - Class in stereodisc

Stereo disk photograph analysis.

IxConverter() - Constructor for class stereodisc.IxConverter

iy - Variable in class VolumeJ.VJCell

Position of this cell in objectspace coordinates.

iy - Variable in class VolumeJ.VJVoxelLoc

iz - Variable in class VolumeJ.VJCell

Position of this cell in objectspace coordinates.

iz - Variable in class VolumeJ.VJVoxelLoc