A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

B

B - Static variable in class features.color.Channel

b - Variable in class registration.SearchMI

b - Variable in class volume.VolumeRGB

The brightness of each voxel as a byte (0-225).

b - Variable in class VolumeJ.VJAlphaColor

b - Variable in class VolumeJ.VJrgbValue

BackgroundBlockStatistics(ImageProcessor, int, int, int, int) - Method in class RuggeriEnhanceUp

BackgroundStatistics(ImageProcessor) - Method in class RuggeriEnhanceUp

backproject(Volume) - Method in class VolumeJ.VJProjection

Backprojection around a single axis y.

Backprojector_ - Class in <Unnamed>

This class interfaces the VolumeJ package to a ImageJ plugin.

Backprojector_() - Constructor for class Backprojector_

basedir - Static variable in class stereo.StereoAnalyzer

basedir - Static variable in class stereo.StereoPairSplitter

basedir - Static variable in class stereo.StereoSegmentation

baselineAnalysis(float[][], int, int, int, int, int) - Static method in class retina.OIDAnalysisMethods

Do baseline frame analysis on each frame in a separately.

bd - package bd

BDColorSeparator - Class in bd

BDColorSeparator(ColorProcessor, int, int, BDSeparatorLattice) - Constructor for class bd.BDColorSeparator

BDRedWhiteLattice - Class in bd

BDRedWhiteLattice() - Constructor for class bd.BDRedWhiteLattice

BDSeparatorLattice - Class in bd

BDSeparatorLattice() - Constructor for class bd.BDSeparatorLattice

bdtree(float[][]) - Static method in class classifier.ANN

BDUserInterface - Class in bd

This class links the BD classes.

BDUserInterface() - Constructor for class bd.BDUserInterface

BDVarDetector - Class in bd

BDVarDetector(ImageProcessor, int, int) - Constructor for class bd.BDVarDetector

BDYellowLattice - Class in bd

BDYellowLattice() - Constructor for class bd.BDYellowLattice

Beaudetx - Class in volume

This class implements Beaudet differentiation in x direction.

Beaudetx() - Constructor for class volume.Beaudetx

Initialize Beaudet kernel.

betacf(double, double, double) - Static method in class bijnum.BIJfunctions

betai(double, double, double) - Static method in class bijnum.BIJfunctions

BIJfft - Class in bijnum

This class implements a one-dimensional real->complex fast fourier transform Copyright (c) 1999-2004, Michael Abramoff.

BIJfft(float[]) - Constructor for class bijnum.BIJfft

Set up a BIJfft a matrix x of length power of 2.

BIJfft(double[]) - Constructor for class bijnum.BIJfft

Set up a BIJfft a matrix x of length power of 2.

BIJfht - Class in bijnum

This class implements the fast Hartley transform on matrices and vectors (real float matrices).

BIJfht(int) - Constructor for class bijnum.BIJfht

Set up a BIJfht for matrices of size length = maxNxmaxN

bijfit - package bijfit

BIJfit - Class in bijnum

This class implements useful linear and polynomial regression and root finding from Press, Flannery, Teukolsky, Vetterling, Numerical Recipes in C 2nd ed, Cambridge University Press, 1986 Copyright implementation (c) 1999-2004, Michael Abramoff.

BIJfit() - Constructor for class bijnum.BIJfit

BIJfunctions - Class in bijnum

This class implements useful numerical functions from Press, Flannery, Teukolsky, Vetterling, Numerical Recipes in C 2nd ed, Cambridge University Press, 1986 Copyright implementation (c) 1999-2004, Michael Abramoff.

BIJfunctions() - Constructor for class bijnum.BIJfunctions

BIJgifa - Class in bijnum

Implementation of GIFA (generalized indicator function approach).

BIJgifa() - Constructor for class bijnum.BIJgifa

BIJJacobi - Class in bijnum

This class implements the jacobi function as a Java class.

BIJJacobi(float[][], boolean) - Constructor for class bijnum.BIJJacobi

Create new instance to compute eigenvectors, eigenvalues.

BIJJacobi(float[][]) - Constructor for class bijnum.BIJJacobi

Create new instance to compute eigenvectors, eigenvalues.

BIJknn - Class in bijnum

k Nearest Neighborhood (brute-force) implementation.

BIJknn(int) - Constructor for class bijnum.BIJknn

BIJknn(float[][], float[], int) - Constructor for class bijnum.BIJknn

BIJmatrix - Class in bijnum

Implements methods for large (by necessity, float) matrices, including covariance of matrix, eigenvectors and others.

BIJmatrix() - Constructor for class bijnum.BIJmatrix

BIJmi - Class in bijnum

Mutual infromation processing routines.

BIJmi(float, float, float) - Constructor for class bijnum.BIJmi

BIJmulticlass - Class in bijnum

BIJ statistical methods for multiclass systems.

BIJmulticlass() - Constructor for class bijnum.BIJmulticlass

bijnum - package bijnum

BIJpca - Class in bijnum

Principal component analysis (PCA) on 2-D sequences (ie.

BIJpca() - Constructor for class bijnum.BIJpca

Set up PCA.

BIJpca(float[][], float[][]) - Constructor for class bijnum.BIJpca

Set up PCA for already computed coordinates and eigenimages.

BIJShortMatrix - Class in bijnum

Implements methods for large short matrices.

BIJShortMatrix() - Constructor for class bijnum.BIJShortMatrix

BIJstats - Class in bijnum

BIJ statistical methods inherited from MatLab.

BIJstats() - Constructor for class bijnum.BIJstats

BIJtransform - Class in bijnum

This class implements static transformation matrix operations for 2-D and 3-D transformation matrices.

BIJtransform() - Constructor for class bijnum.BIJtransform

BIJutil - Class in bijnum

Utilities to link BIJ things to ImageJ.

BIJutil() - Constructor for class bijnum.BIJutil

bilinear(float[], int, float, float) - Static method in class volume.Transformer

Bilinearly interpolate the pixel at x,y.

bilinearExtend(float[], int, int, float, float) - Static method in class volume.Transformer

Interpolate the pixel at x,y in image, extend if x,y not in image .

bin(double[], int) - Static method in class bijnum.BIJutil

Bin a vector x.

binIndex(int[], float) - Static method in class bijnum.BIJstats

Compute the lowest bin into which the highest p percent of occurrences falls.

binTranspose(float[][], int, int) - Static method in class retina.AngiographAnalyzer

Bin each column of matrix a for bin size n and transpose the resulting matrix.

bl(float[][][], int, int, double, double) - Static method in class FlowJ.FlowJMapper

This is a HACK and should not be here.

Blas - Class in bijnum

Blas() - Constructor for class bijnum.Blas

blb - Variable in class VolumeJ.VJVoxelLoc

blendComposeScalar(VJAlphaColor, VJShade) - Method in class VolumeJ.VJAlphaColor

Composing.

blf - Variable in class VolumeJ.VJVoxelLoc

BlobDetector - Class in bd

BlobDetector(ImageProcessor, int, int) - Constructor for class bd.BlobDetector

BLOCK - Static variable in class retina.OIDAnalysisMethods

BLOCK - Static variable in class retina.OIDProcessor

blockAnalysis(float[][][], int, String, String, String[], int, int) - Static method in class retina.OIDAnalysisMethods

Analyze r blockwise.

BlockStatistics(ImageProcessor, int, int, int, int) - Method in class RuggeriEnhanceUp

brb - Variable in class VolumeJ.VJVoxelLoc

brf - Variable in class VolumeJ.VJVoxelLoc

Brightness - Static variable in class features.color.Channel

BY - Static variable in class features.color.Channel